Workshop - July 6-8, 2022 - Torino

The workshop will cover both stochastic and deterministic Chemical Reaction Networks, modelling and inference. There is no registration fee, but participants are asked to cover their expenses (there might be few motivated exceptions).

The event will take place at a different venue than the Summer School organized the week after by the Politecnico di Torino (more info on the school are available at the link above).


Local organizing committee


Contacts

Program

Wednesday 6 Thursday 7 Friday 8
09:00
09:35
Tomislav Plesa 09:00
09:35
Martina Amongero
09:35
10:10
Vittoria Martinelli 09:35
10:10
Elena Sabbioni
10:20
10.50
Registration 10:10
10:45
Iacopo Ruolo 10:10
10:45
Giulia Della Croce
10:50
11:05
Opening 10:45
11:05
Coffee break 10:45
11:05
Coffee break
11:05
11:40
Panqiu Xia 11:05
11:40
Robert Patterson 11:05
11:40
Francesco Puccioni
11:40
12:15
Andrés Ortiz-Muñoz 11:40
12:15
Michiel Renger 11:40
12:15
Rachel Topno
12:15
12:50
Daniele Cappelletti 12:15
12:50
Romain Yvinec 12:15
12:50
Kairui Li
12:50
14:30
Lunch 12:50
14:30
Lunch 12:50
14:30
Lunch
14:30
15:05
Francesca Randone 14:30
15:05
Maya Mincheva 14:30
15:05
Discussion
15:05
15:40
Lucia Nasti 15:05
15:40
Sarang Nath
15:40
16:15
Simone Pernice 15:40
16:15
János Tóth
16:15
16:35
Coffee break 16:15
16:35
Coffee break
16:35
17:10
Claudio Del Sole 16:35
17:10
Enrico Bibbona
17:10
17:45
Alberto Lanconelli 17:10
17:45
Anderson Melchor Hernandez
19:30 Social dinner

Speakers

The following is the list of speakers in alphabetic order. Click the title to read the abstract.

Speaker Affiliation Title of the talk
Martina Amongero Politecnico di Torino Analysing the Covid-19 pandemic in Italy with the SIPRO model
Enrico Bibbona Politecnico di Torino Multiple latent clustering model for the inference of RNA life-cycle kinetic rates from sequencing data
Daniele Cappelletti Politecnico di Torino Stochastic reaction networks in stochastic environment
Claudio Del Sole Università Bocconi Multiscale limits of Chemical Reaction Networks with Fast Absorption and Slow Escape
Giulia Della Croce di Dojola Politecnico di Torino Estimating the ratio between the contagiousness of two viral strains
Alberto Lanconelli University of Bologna Using Gaussian analysis to solve a chemical diffusion master equation
Kairui Li University of St Andrews Quantifying Cytoskeletal Dynamics and Remodeling from Live-imaging Microscopy Data
Vittoria Martinelli Università di Napoli Federico II Multicellular PI control for gene regulation in microbial consortia
Anderson Melchor Hernandez Politecnico di Torino Homogeneous open quantum walks in a Lattice
Maya Mincheva Northern Illinois University Reaction Networks with Time Delays
Lucia Nasti Gran Sasso Science Institute Efficient analysis of chemical reaction networks dynamics based on Input-Output monotonicity
Sarang Nath Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark Electrical Representations of (Bio)chemical Reaction Networks
Andrés Ortiz-Muñoz Santa Fe Institute Combinatorial Semantics for Stochastic Chemical Reaction Networks
Robert Patterson WIAS, Berlin Large deviations with vanishing reactant concentrations
Simone Pernice Università di Torino GreatMod: A general computational framework for modeling Chemical Reaction Networks
Tomislav Plesa University of Cambridge Integral feedback in synthetic biology: Negative-equilibrium catastrophe
Francesco Puccioni Imperial College of London Stochastic modelling of agent-based populations
Francesca Randone IMT School for Advanced Studies Lucca Refining deterministic approximations of stochastic reaction networks through dynamic boundary projection
Michiel Renger WIAS Berlin Time reversal (anti)symmetry in reaction networks
Iacopo Ruolo University of Naples Federico II Elucidation of TFEB nuclear translocation dynamics in human cells by means of Quantitative Modelling and Microfluidics
Elena Sabbioni Politecnico di Torino Bayesian approach for modelling RNA transcription and RNA velocity
Rachel Topno Institut de Génétique Humaine Extrinsic and intrinsic transcriptional noise in the control of HIV-1 latency
János Tóth Budapest University of Technology and Economics TBA
Panqiu Xia University of Copenhagen Complex balanced distributions for chemical reaction networks and their applications
Romain Yvinec PRC, INRAE, CNRS, Université de Tours Stochastic Becker-Döring model: large population and large time results for phase transition phenomena

Participants

Martina Amongero, Politecnico di Torino
Riccardo Aucello, Università di Torino
Daniele Baccega, Università di Torino
Felipe Campos, University of California - San Diego
Alessandra Cauli
Claudio Del Sole, Università Bocconi
Giulia Della Croce di Dojola, Politecnico di Torino
Louis Faul, University of Fribourg
Jinyoung Kim, Korea Pohang University of Science and Technology
Josephine Wairimu Kagunda, Kenyatta University
Ananda Kube, Kenyatta University
Alberto Lanconelli, Università of Bologna
Lucie Laurence, INRIA
Kairui Li, University of St Andrews
Vittoria Martinelli, Università di Napoli Federico II
Gianluca Mastrantonio, Politecnico di Torino
Anderson Melchor Hernandez, Politecnico di Torino
Maya Mincheva, Northern Illinois University
Lucia Nasti, Gran Sasso Science Institute
Sarang Nath, Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark
Winifred Nduku Mutuku Njane, Kenyatta University
Andrés Ortiz-Muñoz, Santa Fe Institute
Robert Patterson, WIAS - Berlin

Stefano Pedarra, Centre de Recerca Matemàtica
Berk Tan Perçin, University of Bologna
Simone Pernice, Università di Torino
Giovanni Pistone, Politecnico di Torino
Tomislav Plesa, University of Cambridge
Matteo Polettini, University of Luxembourg
Lea Popovic, Concordia University
Francesco Puccioni, Imperial College of London
Hamid Rahkooy, Max Plack Institute for Informatics
Francesca Randone, IMT School for Advanced Studies Lucca
Michiel Renger, WIAS Berlin
Philippe Robert, INRIA
Diego Rojas La Luz, University of Wisconsin-Madison
Elena Rosso, Univerisità di Torino
Iacopo Ruolo, Università di Napoli Federico II
Elena Sabbioni, Politecnico di Torino
Rachel Topno, IGH
János Tóth, Budapest University of Technology and Economics
Barbara Trivellato, Politecnico di Torino
Richard Xavier, University of Fribourg
Panqiu Xia, University of Copenhagen
Hiu Ching Yip, Politecnico di Torino
Romain Yvinec, PRC, INRAE, CNRS, Université de Tours


Contacts

Venue

The workshop will take place at the Department of Mathematical Sciences "G. L. Lagrange" of Politecnico di Torino


Suggested Accommodation

Department of Mathematical Sciences
"G. L. Lagrange"

Politecnico di Torino

Corso Duca degli Abruzzi, 24
10129 Torino TO
ITALY

Venue

The workshop will take place at the Department of Mathematical Sciences "G. L. Lagrange" of Politecnico di Torino


Suggested Accommodation

Department of Mathematical Sciences "G. L. Lagrange"

Politecnico di Torino

Corso Duca degli Abruzzi, 24
10129 Torino TO
ITALY


How to get to Politecnico di Torino

  • From Milano Malpensa (MXP) airport:
    there is a shuttle service, see a possible route.
  • From Torino Caselle (TRN) airport:
    there is a shuttle service, once any 30 minutes, see the complete timetable.
Both shuttle services stops at the Torino Porta Susa train station.

  • From Porta Susa (PS) train and bus station:
    you can take a walk (map) or get tram n. 10.
  • From Porta Nuova (PN) train and bus station:
    you can take a walk (map) or get bus n. 33, 58 or 58/.
MXP TRN PS PN PoliTO

Please note that public transport tickets must be purchased in advance at kiosks, tobacconist or subway stations.

How to get to Politecnico di Torino

  • From Milano Malpensa (MXP) airport:
    there is a shuttle service, see a possible route.
  • From Torino Caselle (TRN) airport:
    there is a shuttle service, once any 30 minutes, see the complete timetable.
Both shuttle services stops at the Torino Porta Susa train station.

  • From Porta Susa (PS) train and bus station:
    you can take a walk (map) or get tram n. 10.
  • From Porta Nuova (PN) train and bus station:
    you can take a walk (map) or get bus n. 33, 58 or 58/.
MXP TRN PS PN PoliTO
Please note that public transport tickets must be purchased in advance at kiosks, tobacconist or subway stations.

Contacts

Registration

Registration is now closed.


Contacts